Concise Overview of things learned
I learned how to select and download files from GEO including metadata. I also learned how to import the same files into R. Beside downloading and importing files, I learned how to use different R packages for quality control and these tools for this week’s deliverables. I learned how to perform PCA unaided and to cluster my heat-maps according to groups.
Tools used:
ggplot2, Pheamap, etc
Soft skills:
I learned to communicate and collaborate with my teammates.
Three Achievement this week:
Downloaded and set up Git on my laptop. Created my first repository as well as my first pull and push request. I also learned how to perform PCA.
Record of meetings attended:
I attended the webinar, office hour, group meeting, and the presentation.
Goals for this week
To attend the Git and Github webinar,
to attend office hour and to complete this week’s deliverables
A detailed statement of the task done.
I complete this week’s tasks/deliverables although I struggled with batch correction because the instruction oh how to create a model matrix was not crystal to me. thanks to the task lead’s I figured it out.
